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Some updates to the website (#16)
Some small updates
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index.md

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@@ -27,21 +27,40 @@ Their talk also covered the latest developments around JuliaMolSim.
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for computing key atomistic properties of structures, including
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energies, forces, virial stresses.
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Integrating with the above interfaces are the following packages
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from the JuliaMolSim ecosystem:
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The following packages are part of the JuliaMolSim and based
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on the above interfaces.
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We also feature a few packages for
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[cross-ecosystem links](#cross-ecosystem_links).
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## Building and loading atomistic structures
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- [AtomsBuilder.jl](https://github.com/JuliaMolSim/AtomsBuilder.jl):
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Package for building structures as `AbstractSystem`s (surfaces, defects, ...)
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Package for building structures as `AbstractSystem` (surfaces, defects, ...)
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- [AtomsIO.jl](https://github.com/mfherbst/AtomsIO.jl):
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Read and write structures/trajectories to a variety of file formats
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## Some AtomsCalculators
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- [ACEpotentials.jl](https://github.com/ACEsuit/ACEpotentials.jl): Interatomic potential learning using the Atomic cluster expansion; see also [ACEsuit](https://github.com/ACEsuit) for related packages.
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- [DFTK.jl](https://dftk.org): A flexible code for density-functional theory simulations
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- [EmpiricalPotentials.jl](https://github.com/JuliaMolSim/EmpiricalPotentials.jl)
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and [InteratomicPotentials.jl](https://github.com/cesmix-mit/InteratomicPotentials.jl):
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Simple parametrised materials potentials (EAM, LJ, ...)
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## Dynamics and atomic arrangements
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- [GeometryOptimization.jl](https://github.com/JuliaMolSim/GeometryOptimization.jl/):
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Optimise atomistic structures (atomic positions and lattices)
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based on a framework featuring generic optimisers.
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- [Molly.jl](https://juliamolsim.github.io/Molly.jl/stable/):
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Molecular simulation in Julia
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## Cross-ecosystem links
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- [ASEconvert.jl](https://github.com/mfherbst/ASEconvert.jl):
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Integration with the [Atomistic Simulation Environment (ASE)](https://wiki.fysik.dtu.dk/ase/index.html): Use ASE Atoms as `AbstractSystem`,
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use ASE Calculators as `AbstractCalculator`.
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- [IPICalculator.jl](https://github.com/JuliaMolSim/IPICalculator.jl/):
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Two-way integration with the [IPI socket protocol](https://ipi-code.org/);
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enables usage of Julia calculators in external ecosystems and vice versa
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usage of external calculators in Julia.
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## Other packages
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Some other packages for molecular and materials modelling worth mentioning:
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- [Wannier.jl](https://github.com/qiaojunfeng/Wannier.jl):

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