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Merge pull request #27 from QCBSRworkshops/challenge-2-corrections-en
Minor adjustments to Challenge 2 in the EN presentation
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pres-en/workshop08-pres-en.Rmd

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@@ -1084,19 +1084,24 @@ exclude:true
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---
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# Challenge 2 - Solution ![:cube]()
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```{r,eval=TRUE}
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**1.** Create 2 new models, with `x3` as a linear and smoothed term.
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```{r, eval=TRUE}
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# Add Latitude as a linear term
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three_term_model <- gam(Sources ~
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Season + s(SampleDepth) + s(RelativeDepth) +
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Latitude,
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Latitude, #<<
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data = isit, method = "REML")
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three_term_summary <- summary(three_term_model)
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# Add Latitude as a smooth term
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three_smooth_model <- gam(Sources ~
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Season + s(SampleDepth) + s(RelativeDepth) +
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s(Latitude),
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s(Latitude), #<<
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data = isit, method = "REML")
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```
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```{r, eval=TRUE}
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three_smooth_summary <- summary(three_smooth_model)
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```
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Let us begin by plotting the the 4 effects that are now included in each model.
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---
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# Challenge 2 - Solution ![:cube]()
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.pull-left4[
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```{r, eval = FALSE}
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par(mfrow = c(2,2))
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plot(three_smooth_model, all.terms = TRUE)
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plot(three_smooth_model,
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all.terms = TRUE)
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```
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]
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```{r, fig.width = 8, fig.height = 7, echo = FALSE}
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.pull-right4[
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```{r, fig.width = 7, fig.height = 6.5, echo = FALSE}
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plot(three_smooth_model, page = 1, all.terms = TRUE)
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```
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]
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---
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# Challenge 2 - Solution ![:cube]()
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