Use newer pyod version and fix bug in COPOD (#46)

Sebastian Schmidl · web-flow · commit b3bb180d077d · 2024-01-30T09:44:30.000+01:00
* feat(pyod): update pyod version for all algorithms to latest * fix(copod): bump pyod version to fix bug in copod (#43) * feat: use newer pyod version in all algorithms * fix: use pyod images
diff --git a/cblof/Dockerfile b/cblof/Dockerfile
@@ -1,4 +1,4 @@
-FROM ghcr.io/timeeval/python3-base:0.3.0
+FROM ghcr.io/timeeval/pyod:0.3.1
 
 LABEL maintainer="sebastian.schmidl@hpi.de"
 LABEL org.opencontainers.image.licenses=MIT
diff --git a/cblof/manifest.json b/cblof/manifest.json
@@ -2,7 +2,7 @@
     "title": "CBLOF",
     "description": "Implementation of https://doi.org/10.1016/S0167-8655(03)00003-5.",
     "inputDimensionality": "multivariate",
-    "version": "0.3.0",
+    "version": "0.3.1",
     "authors": "Zengyou He, Xiaofei Xu, Shengchun Deng",
     "language": "Python",
     "type": "Detector",
diff --git a/cblof/requirements.txt b/cblof/requirements.txt
@@ -2,4 +2,4 @@ numpy>=1.19.5
 pandas>=1.2.1
 scipy>=1.6.0
 scikit-learn>=0.24.1
-pyod==0.9.2
+pyod>=0.9.2
diff --git a/cof/Dockerfile b/cof/Dockerfile
@@ -1,4 +1,4 @@
-FROM ghcr.io/timeeval/python3-base:0.3.0
+FROM ghcr.io/timeeval/pyod:0.3.1
 
 LABEL maintainer="sebastian.schmidl@hpi.de"
 LABEL org.opencontainers.image.licenses=MIT
diff --git a/cof/manifest.json b/cof/manifest.json
@@ -2,7 +2,7 @@
     "title": "COF",
     "description": "Implementation of https://doi.org/10.1007/3-540-47887-6_53.",
     "inputDimensionality": "multivariate",
-    "version": "0.3.0",
+    "version": "0.3.1",
     "authors": "Jian Tang, Zhixiang Chen, Ada Wai-chee Fu, David W. Cheung",
     "language": "Python",
     "type": "Detector",
diff --git a/cof/requirements.txt b/cof/requirements.txt
@@ -2,4 +2,4 @@ numpy>=1.19.5
 pandas>=1.2.1
 scipy>=1.6.0
 scikit-learn>=0.24.1
-pyod==0.9.2
+pyod>=0.9.2
diff --git a/copod/Dockerfile b/copod/Dockerfile
@@ -1,4 +1,4 @@
-FROM ghcr.io/timeeval/python3-base:0.3.0
+FROM ghcr.io/timeeval/pyod:0.3.1
 
 LABEL maintainer="sebastian.schmidl@hpi.de"
 LABEL org.opencontainers.image.licenses=MIT
diff --git a/copod/manifest.json b/copod/manifest.json
@@ -2,7 +2,7 @@
     "title": "COPOD",
     "description": "Implementation of https://publications.pik-potsdam.de/pubman/faces/ViewItemOverviewPage.jsp?itemId=item_24536.",
     "inputDimensionality": "multivariate",
-    "version": "0.3.0",
+    "version": "0.4.0",
     "authors": "Zheng Li, Yue Zhao, Nicola Botta, Cezar Ionescu, Xiyang Hu, ",
     "language": "Python",
     "type": "Detector",
diff --git a/copod/requirements.txt b/copod/requirements.txt
@@ -2,4 +2,4 @@ numpy>=1.19.5
 pandas>=1.2.1
 scipy>=1.6.0
 scikit-learn>=0.24.1
-pyod==0.9.2
+pyod>=1.1.0
diff --git a/hbos/Dockerfile b/hbos/Dockerfile
@@ -1,4 +1,4 @@
-FROM ghcr.io/timeeval/pyod:0.3.0
+FROM ghcr.io/timeeval/pyod:0.3.1
 
 LABEL maintainer="sebastian.schmidl@hpi.de"
 LABEL org.opencontainers.image.licenses=MIT
diff --git a/hbos/manifest.json b/hbos/manifest.json
@@ -2,7 +2,7 @@
     "title": "HBOS",
     "description": "Implementation of https://citeseerx.ist.psu.edu/viewdoc/citations;jsessionid=2B4E3FB2BB07448253B4D45C3DAC2E95?doi=10.1.1.401.5686.",
     "inputDimensionality": "multivariate",
-    "version": "0.3.0",
+    "version": "0.3.1",
     "authors": "Markus Goldstein, Andreas Dengel",
     "language": "Python",
     "type": "Detector",
diff --git a/hbos/requirements.txt b/hbos/requirements.txt
@@ -1,3 +1,3 @@
 numpy>=1.19.5
 pandas>=1.2.1
-pyod==0.9.2
+pyod>=0.9.2
diff --git a/iforest/Dockerfile b/iforest/Dockerfile
@@ -1,4 +1,4 @@
-FROM ghcr.io/timeeval/pyod:0.3.0
+FROM ghcr.io/timeeval/pyod:0.3.1
 
 LABEL maintainer="sebastian.schmidl@hpi.de"
 LABEL org.opencontainers.image.licenses=MIT
diff --git a/iforest/manifest.json b/iforest/manifest.json
@@ -2,7 +2,7 @@
     "title": "Isolation Forest (iForest)",
     "description": "Implementation of https://doi.org/10.1145/2133360.2133363.",
     "inputDimensionality": "multivariate",
-    "version": "0.3.0",
+    "version": "0.3.1",
     "authors": "Fei Tony Liu and Kai Ming Ting and Zhi-Hua Zhou",
     "language": "Python",
     "type": "Detector",
diff --git a/iforest/requirements.txt b/iforest/requirements.txt
@@ -1,3 +1,3 @@
 numpy>=1.19.5
 pandas>=1.2.1
-pyod==0.9.2
+pyod>=0.9.2
diff --git a/knn/Dockerfile b/knn/Dockerfile
@@ -1,4 +1,4 @@
-FROM ghcr.io/timeeval/pyod:0.3.0
+FROM ghcr.io/timeeval/pyod:0.3.1
 
 LABEL maintainer="sebastian.schmidl@hpi.de"
 LABEL org.opencontainers.image.licenses=MIT
diff --git a/knn/manifest.json b/knn/manifest.json
@@ -2,7 +2,7 @@
     "title": "KNN",
     "description": "Implementation of https://doi.org/10.1145/342009.335437.",
     "inputDimensionality": "multivariate",
-    "version": "0.3.0",
+    "version": "0.3.1",
     "authors": "Sridhar Ramaswamy,Rajeev Rastogi, Kyuseok Shim",
     "language": "Python",
     "type": "Detector",
diff --git a/knn/requirements.txt b/knn/requirements.txt
@@ -1,3 +1,3 @@
 numpy>=1.19.5
 pandas>=1.2.1
-pyod==0.9.2
+pyod>=0.9.2
diff --git a/lof/Dockerfile b/lof/Dockerfile
@@ -1,4 +1,4 @@
-FROM ghcr.io/timeeval/pyod:0.3.0
+FROM ghcr.io/timeeval/pyod:0.3.1
 
 LABEL maintainer="sebastian.schmidl@hpi.de"
 LABEL org.opencontainers.image.licenses=MIT
diff --git a/lof/manifest.json b/lof/manifest.json
@@ -2,7 +2,7 @@
     "title": "LOF",
     "description": "Implementation of https://doi.org/10.1145/342009.335388.",
     "inputDimensionality": "multivariate",
-    "version": "0.3.0",
+    "version": "0.3.1",
     "authors": "Markus M. Breunig, Hans-Peter Kriegel, Raymond T. Ng, Jörg Sander",
     "language": "Python",
     "type": "Detector",
diff --git a/lof/requirements.txt b/lof/requirements.txt
@@ -1,3 +1,3 @@
 numpy>=1.19.5
 pandas>=1.2.1
-pyod==0.9.2
+pyod>=0.9.2
diff --git a/multi_subsequence_lof/Dockerfile b/multi_subsequence_lof/Dockerfile
@@ -1,4 +1,4 @@
-FROM ghcr.io/timeeval/pyod:0.3.0
+FROM ghcr.io/timeeval/pyod:0.3.1
 
 LABEL maintainer="sebastian.schmidl@hpi.de"
 LABEL org.opencontainers.image.licenses=MIT
diff --git a/multi_subsequence_lof/manifest.json b/multi_subsequence_lof/manifest.json
@@ -2,7 +2,7 @@
     "title": "Multi-Sub-LOF",
     "description": "LOF on sliding windows of multivariate time series to detect subsequence anomalies.",
     "inputDimensionality": "multivariate",
-    "version": "0.3.0",
+    "version": "0.3.1",
     "authors": "Sebastian Schmidl, Niklas Köhnecke",
     "language": "Python",
     "type": "Detector",
diff --git a/multi_subsequence_lof/requirements.txt b/multi_subsequence_lof/requirements.txt
@@ -1,4 +1,4 @@
 numpy>=1.19.5
 pandas>=1.2.1
-pyod==0.9.2
+pyod>=0.9.2
 scikit-learn>=0.24,<0.25
diff --git a/pcc/Dockerfile b/pcc/Dockerfile
@@ -1,4 +1,4 @@
-FROM ghcr.io/timeeval/pyod:0.3.0
+FROM ghcr.io/timeeval/pyod:0.3.1
 
 LABEL maintainer="sebastian.schmidl@hpi.de"
 LABEL org.opencontainers.image.licenses=MIT
diff --git a/pcc/manifest.json b/pcc/manifest.json
@@ -2,7 +2,7 @@
     "title": "PCC",
     "description": "Implementation of http://citeseerx.ist.psu.edu/viewdoc/summary;jsessionid=003008C2CF2373B9C332D4A1DB035515?doi=10.1.1.66.299.",
     "inputDimensionality": "multivariate",
-    "version": "0.3.0",
+    "version": "0.3.1",
     "authors": "Mei-ling Shyu, Shu-ching Chen, Kanoksri Sarinnapakorn, Liwu Chang",
     "language": "Python",
     "type": "Detector",
diff --git a/pcc/requirements.txt b/pcc/requirements.txt
@@ -1,3 +1,3 @@
 numpy>=1.19.5
 pandas>=1.2.1
-pyod==0.9.2
+pyod>=0.9.2
diff --git a/subsequence_if/Dockerfile b/subsequence_if/Dockerfile
@@ -1,4 +1,4 @@
-FROM ghcr.io/timeeval/pyod:0.3.0
+FROM ghcr.io/timeeval/pyod:0.3.1
 
 LABEL maintainer="sebastian.schmidl@hpi.de"
 LABEL org.opencontainers.image.licenses=MIT
diff --git a/subsequence_if/manifest.json b/subsequence_if/manifest.json
@@ -2,7 +2,7 @@
     "title": "Subsequence IF",
     "description": "Isolation Forest on sliding windows to detect subsequence anomalies.",
     "inputDimensionality": "univariate",
-    "version": "0.3.0",
+    "version": "0.3.1",
     "authors": "Sebastian Schmidl",
     "language": "Python",
     "type": "Detector",
diff --git a/subsequence_if/requirements.txt b/subsequence_if/requirements.txt
@@ -1,3 +1,3 @@
 numpy>=1.19.5
 pandas>=1.2.1
-pyod==0.9.2
+pyod>=0.9.2
diff --git a/subsequence_knn/Dockerfile b/subsequence_knn/Dockerfile
@@ -1,4 +1,4 @@
-FROM ghcr.io/timeeval/pyod:0.3.0
+FROM ghcr.io/timeeval/pyod:0.3.1
 
 LABEL maintainer="sebastian.schmidl@hpi.de"
 LABEL org.opencontainers.image.licenses=MIT
diff --git a/subsequence_knn/manifest.json b/subsequence_knn/manifest.json
@@ -2,7 +2,7 @@
     "title": "Sub-KNN",
     "description": "KNN on sliding windows to detect subsequence anomalies.",
     "inputDimensionality": "multivariate",
-    "version": "0.3.0",
+    "version": "0.3.1",
     "authors": "Sebastian Schmidl,Sridhar Ramaswamy,Rajeev Rastogi,Kyuseok Shim",
     "language": "Python",
     "type": "Detector",
diff --git a/subsequence_knn/requirements.txt b/subsequence_knn/requirements.txt
@@ -1,3 +1,3 @@
 numpy>=1.19.5
 pandas>=1.2.1
-pyod==0.9.2
+pyod>=0.9.2
diff --git a/subsequence_lof/Dockerfile b/subsequence_lof/Dockerfile
@@ -1,4 +1,4 @@
-FROM ghcr.io/timeeval/pyod:0.3.0
+FROM ghcr.io/timeeval/pyod:0.3.1
 
 LABEL maintainer="sebastian.schmidl@hpi.de"
 LABEL org.opencontainers.image.licenses=MIT
diff --git a/subsequence_lof/manifest.json b/subsequence_lof/manifest.json
@@ -2,7 +2,7 @@
     "title": "Subsequence LOF",
     "description": "LOF on sliding windows to detect subsequence anomalies.",
     "inputDimensionality": "univariate",
-    "version": "0.3.0",
+    "version": "0.3.1",
     "authors": "Sebastian Schmidl",
     "language": "Python",
     "type": "Detector",
diff --git a/subsequence_lof/requirements.txt b/subsequence_lof/requirements.txt
@@ -1,3 +1,3 @@
 numpy>=1.19.5
 pandas>=1.2.1
-pyod==0.9.2
+pyod>=0.9.2

Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`		`-FROM ghcr.io/timeeval/python3-base:0.3.0`
	`1`	`+FROM ghcr.io/timeeval/pyod:0.3.1`
`2`	`2`
`3`	`3`	`LABEL maintainer="sebastian.schmidl@hpi.de"`
`4`	`4`	`LABEL org.opencontainers.image.licenses=MIT`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`		`-FROM ghcr.io/timeeval/pyod:0.3.0`
	`1`	`+FROM ghcr.io/timeeval/pyod:0.3.1`
`2`	`2`
`3`	`3`	`LABEL maintainer="sebastian.schmidl@hpi.de"`
`4`	`4`	`LABEL org.opencontainers.image.licenses=MIT`