hotfix parsing obj names to URLs

Author: matthiasprobst

CHANGELOG.md

@@ -2,6 +2,11 @@
 
 Log of changes in the versions
 
+## v2.3.1
+
+- fixing error in parsing obj name. "/" is safed and will not be converted anymore
+
+
 ## v2.3.0
 
 - hotfix avoiding blank nodes for hdf filter

CITATION.cff

@@ -11,7 +11,7 @@ authors:
     given-names: "Lucas"
     orcid: "https://orcid.org/0000-0002-4116-0065"
 title: "h5rdmtoolbox - HDF5 Research Data Management Toolbox"
-version: 2.3.0
-doi: 10.5281/zenodo.16881561
+version: 2.3.1
+doi: 10.5281/zenodo.17063344
 date-released: 2025-09-01
 url: "https://github.com/matthiasprobst/h5rdmtoolbox"

codemeta.json

@@ -4,7 +4,7 @@
     "license": "https://spdx.org/licenses/MIT",
     "codeRepository": "git+https://github.com/matthiasprobst/h5RDMtoolbox.git",
     "name": "h5RDMtoolbox",
-    "version": "2.3.0",
+    "version": "2.3.1",
     "description": "Supporting a FAIR Research Data lifecycle using Python and HDF5.",
     "applicationCategory": "Engineering",
     "programmingLanguage": [

docs/colab/quickstart.ipynb

@@ -7,9 +7,7 @@
     "scrolled": true
    },
    "outputs": [],
-   "source": [
-    "# !pip install h5rdmtoolbox==2.3.0"
-   ]
+   "source": "# !pip install h5rdmtoolbox==2.3.1"
   },
   {
    "cell_type": "code",
@@ -19,7 +17,7 @@
     {
      "data": {
       "text/plain": [
-       "'2.3.0'"
+       "'2.3.1'"
       ]
      },
      "execution_count": 2,

h5rdmtoolbox/ld/utils.py

@@ -9,7 +9,7 @@
 
 
 def _parse_obj_name(obj_name: str):
-    return urllib.parse.quote(obj_name, safe='')
+    return urllib.parse.quote(obj_name, safe='/')
 
 
 def get_attr_dtype_as_XSD(data):

setup.cfg

@@ -1,6 +1,6 @@
 [metadata]
 name = h5rdmtoolbox
-version = 2.3.0
+version = 2.3.1
 author = Matthias Probst
 author_email = matth.probst@gmail.com
 description = Supporting a FAIR Research Data lifecycle using Python and HDF5.

tests/ld/test_utils.py

@@ -0,0 +1,13 @@
+import unittest
+
+from h5rdmtoolbox.ld.utils import _parse_obj_name
+
+
+class TestUtile(unittest.TestCase):
+
+    def test_parsing_obj_names(self):
+        self.assertEqual(_parse_obj_name("/"), "/")
+        self.assertEqual(_parse_obj_name(" "), "%20")
+        self.assertEqual(_parse_obj_name("/My Group/"), "/My%20Group/")
+        self.assertEqual(_parse_obj_name("/My Group/My Dataset"), "/My%20Group/My%20Dataset")
+        self.assertEqual(_parse_obj_name("/My !&9]231,.0Group/My Dataset "), "/My%20%21%269%5D231%2C.0Group/My%20Dataset%20")

tests/test_version.py

@@ -1,6 +1,7 @@
 import pathlib
 import unittest
-from datetime import datetime
+
+import yaml
 
 from h5rdmtoolbox import __version__, get_package_meta
 
@@ -34,14 +35,13 @@ def test_colab_version(self):
         found = False
         for line in lines:
             if 'pip install' in line:
-                self.assertEqual(line.strip(), f'"# !pip install h5rdmtoolbox=={__version__}"')
+                self.assertTrue(f'"# !pip install h5rdmtoolbox=={__version__}"' in line.strip())
                 found = True
                 break
         self.assertTrue(found)
 
     def test_citation_cff(self):
         citation_cff = __this_dir__ / "../CITATION.cff"
-        import yaml
         with open(citation_cff, 'r') as f:
             cff = yaml.safe_load(f)
         self.assertTrue("todo" not in cff["doi"].lower(), "Please replace 'todo' in CITATION.cff")