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‎.circleci/config.yml

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‎.coveragerc

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[run]
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branch = True
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source = mne
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omit =
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*/bin/*
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*/setup.py
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*/mne/fixes*
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*/mne/utils/linalg.py
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*/mne/conftest.py
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[report]
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exclude_lines =
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pragma: no cover
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if __name__ == .__main__.:
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@abstractmethod
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@abstractclassmethod

‎.git-blame-ignore-revs

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# PR number should follow the commit number so that our code credit
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# can parse this file correctly:
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d71e497dcf6f98e19eb81e82e641404a71d2d663 # 1420, split up viz.py
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203a96cbba2732d2e349a8f96065e74bbfd2a53b # 5862, split utils.py
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ff349f356edb04e1b5f0db13deda8d1a20aca351 # 6767, move around manual parts
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31a83063557fbd54d898f00f9527ffc547888395 # 10407, alphabetize docdict
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e81ec528a42ac687f3d961ed5cf8e25f236925b0 # 11667, black
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12395f9d9cf6ea3c72b225b62e052dd0d17d9889 # 11868, YAML indentation
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d6d2f8c6a2ed4a0b27357da9ddf8e0cd14931b59 # 12097, isort
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e7dd1588013179013a50d3f6b8e8f9ae0a185783 # 12261, ruff format
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940ac9553ce42c15b4c16ecd013824ca3ea7244a # 12533, whitespace
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e39995d9be6fc831c7a4a59f09b7a7c0a41ae315 # 12588, percent formatting
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1c5b39ff1d99bbcb2fc0e0071a989b3f3845ff30 # 12603, ruff UP028
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b8b168088cb474f27833f5f9db9d60abe00dca83 # 12779, PR JSONs
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ee64eba6f345e895e3d5e7d2804fa6aa2dac2e6d # 12781, Header unification
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362f9330925fb79a6adc19a42243672676dec63e # 12799, UP038

‎.git_archival.txt

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node: $Format:%H$
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node-date: $Format:%cI$
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describe-name: $Format:%(describe:tags=true,match=*[0-9]*)$

‎.gitattributes

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.git_archival.txt export-subst

‎.github/CODEOWNERS

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# The purpose of this file is to trigger review requests when PRs touch
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# particular files. Those reviews are not mandatory, however it's often useful
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# to have an expert pinged who is interested in only one part of MNE and
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# doesn't follow general development. Having your name in this file does not
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# imply ownership of the code -- the CODEOWNERS filename is a misnomer -- but
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# rather just serves to indicate that you want to be pinged for potential
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# review.
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#
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# Note that only GitHub handles (whether individuals or teams) with commit
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# rights should be added to this file.
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# See https://docs.github.com/en/github/creating-cloning-and-archiving-repositories/about-code-owners
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# for more details about how CODEOWNERS works.
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# This file was adapted from SciPy.
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# Each line is a file pattern followed by one or more owners.
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# Syntax follows .gitignore, see https://git-scm.com/docs/gitignore#_pattern_format
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# Headings ideally should correspond to domains of knowledge/expertise, starting with
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# algorithms implementations (generally main codebase mne/ and related docs) followed by
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# project-level and miscellaneous items (CI, general documentation, etc.).
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#################################################
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# Algorithms, implementations, and related docs #
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#################################################
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# Artifact regression
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/mne/preprocessing/_regress.py @wmvanvliet
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/mne/preprocessing/tests/test_regress.py @wmvanvliet
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# Beamforming
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/mne/beamformer @britta-wstnr
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*dics*.py @britta-wstnr @wmvanvliet # related tutorials and examples
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*lcmv*.py @britta-wstnr
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# Channels
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/mne/channels @agramfort @mscheltienne @dengemann @jasmainak
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# Core sensor-space classes
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/mne/epochs.py @drammock @agramfort @mscheltienne @dengemann
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/mne/evoked.py @drammock @agramfort @mscheltienne @dengemann
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/mne/io/*.* @drammock @cbrnr @agramfort @mscheltienne @dengemann
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# Current-source density
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/mne/preprocessing/_csd.py @alexrockhill @dengemann
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# Decoding
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/mne/decoding/csp.py @cbrnr @agramfort @dengemann
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/mne/decoding/*.py @jasmainak
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# fNIRS
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/mne/preprocessing/nirs @rob-luke
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*fnirs*.py @rob-luke
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# forward
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/mne/forward/ @agramfort @jasmainak
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*forward*.py @agramfort
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# Intracranial
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/mne/preprocessing/ieeg @alexrockhill @adam2392
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*seeg*.py @alexrockhill @adam2392
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*ecog*.py @alexrockhill @adam2392
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# Inverse Sparse
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/mne/inverse_sparse @agramfort
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*mxne*.py @agramfort # related tutorials and examples
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*gamma*.py @agramfort # related tutorials and examples
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# IO
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/mne/io/brainvision @sappelhoff @cbrnr @adam2392
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/mne/io/nirx @rob-luke
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/mne/io/snirf @rob-luke
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/mne/export @sappelhoff @cbrnr
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/mne/io/eeglab.py @jasmainak
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/mne/io/eeglab/tests/test_eeglab.py @jasmainak
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# Minimum Norm
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/mne/minimum_norm @agramfort
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# Preprocessing
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/mne/preprocessing/ica.py @cbrnr @adam2392 @agramfort @mscheltienne @dengemann
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/mne/preprocessing/infomax_.py @cbrnr @adam2392 @mscheltienne @dengemann
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/mne/preprocessing/*annotate*.py @mscheltienne
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/mne/preprocessing/bads.py @mscheltienne
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/mne/preprocessing/e*g.py @mscheltienne
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# Report
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/mne/report @hoechenberger @dengemann @jasmainak
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# Simulation
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/mne/simulation/ @agramfort
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*simulate*.py @agramfort
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# Surface + transforms
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/mne/surface.py @alexrockhill @larsoner
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/mne/transforms.py @alexrockhill @larsoner
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/mne/_freesurfer.py @alexrockhill @larsoner
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# TFR
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/mne/time_frequency @drammock @adam2392 @mscheltienne
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# Viz
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/mne/viz @drammock @dengemann
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/mne/viz/_brain @larsoner @wmvanvliet
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/mne/viz/ui_events.py @wmvanvliet
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/tutorials/visualization @larsoner @wmvanvliet @dengemann
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/examples/visualization @larsoner @dengemann
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# Datasets
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/mne/datasets/brainstorm @jasmainak
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#########################
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# Project-level / other #
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#########################
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# Examples and tutorials
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/examples @drammock @agramfort @dengemann
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/tutorials @drammock @agramfort @dengemann
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# Non-tutorial documentation text and infrastructure
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/doc @larsoner @drammock @agramfort @dengemann
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/logo @drammock
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# Installation documentation
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/doc/install @hoechenberger
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# Project infrastructure and CIs
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/*.* @larsoner @drammock # files in the root directory
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/.circleci @larsoner
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/.github @larsoner
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/tools @larsoner @drammock

‎.github/CONTRIBUTING.md

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# Contributing to MNE-Python
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First off, thanks for taking the time to contribute!
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The following is a quick summary to a set of guidelines for contributing to [MNE-Python](https://github.com/mne-tools/mne-python) on GitHub. These are mostly guidelines, not rules. Use your best judgment, and feel free to propose changes to this document in a pull request.
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## Code of Conduct
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This project and everyone participating in it is governed by the [MNE-Python's Code of Conduct](https://github.com/mne-tools/.github/blob/main/CODE_OF_CONDUCT.md). By participating, you are expected to uphold this code. Please report unacceptable behavior to [mne-conduct@googlegroups.com](mailto:mne-conduct@googlegroups.com).
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## How to contribute
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Before contributing make sure you are familiar with [our contributing guide](https://mne.tools/dev/development/contributing.html).

‎.github/FUNDING 2.yml

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# These are supported funding model platforms
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# github: # Replace with up to 4 GitHub Sponsors-enabled usernames e.g., [user1, user2]
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# patreon: # Replace with a single Patreon username
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open_collective: mne-python
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# ko_fi: # Replace with a single Ko-fi username
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# tidelift: # Replace with a single Tidelift platform-name/package-name e.g., npm/babel
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# community_bridge: # Replace with a single Community Bridge project-name e.g., cloud-foundry
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# liberapay: # Replace with a single Liberapay username
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# issuehunt: # Replace with a single IssueHunt username
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# lfx_crowdfunding: # Replace with a single LFX Crowdfunding project-name e.g., cloud-foundry
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# polar: # Replace with a single Polar username
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# buy_me_a_coffee: # Replace with a single Buy Me a Coffee username
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# thanks_dev: # Replace with a single thanks.dev username
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# custom: # Replace with up to 4 custom sponsorship URLs e.g., ['link1', 'link2']

‎.github/FUNDING.yml

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# These are supported funding model platforms
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# github: # Replace with up to 4 GitHub Sponsors-enabled usernames e.g., [user1, user2]
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# patreon: # Replace with a single Patreon username
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open_collective: mne-python
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# ko_fi: # Replace with a single Ko-fi username
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# tidelift: # Replace with a single Tidelift platform-name/package-name e.g., npm/babel
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# community_bridge: # Replace with a single Community Bridge project-name e.g., cloud-foundry
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# liberapay: # Replace with a single Liberapay username
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# issuehunt: # Replace with a single IssueHunt username
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# lfx_crowdfunding: # Replace with a single LFX Crowdfunding project-name e.g., cloud-foundry
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# polar: # Replace with a single Polar username
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# buy_me_a_coffee: # Replace with a single Buy Me a Coffee username
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# thanks_dev: # Replace with a single thanks.dev username
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# custom: # Replace with up to 4 custom sponsorship URLs e.g., ['link1', 'link2']

‎.github/ISSUE_TEMPLATE/bug_report.yml

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name: 🐛 Bug report
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# See the json schema to help you create / update this form
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# https://json.schemastore.org/github-issue-forms.json
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description: Tell us about errors in our computations or plots.
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labels: ["BUG"]
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body:
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- type: markdown
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attributes:
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value: |
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Please use the [MNE-Python forum](https://mne.discourse.group/) to ask (and answer)
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concrete technical questions or about usage of MNE-Python.
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Use this form *only* if you think there is a bug in MNE-Python code.
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- type: textarea
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attributes:
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label: Description of the problem
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validations:
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required: true
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- type: textarea
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attributes:
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label: Steps to reproduce
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description: |
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Paste here a code snippet or minimal working example
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([MWE](https://en.wikipedia.org/wiki/Minimal_Working_Example))
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to replicate your problem, using one of the
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[datasets shipped with MNE-Python](https://mne.tools/stable/documentation/datasets.html#datasets),
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preferably the one called [sample](https://mne.tools/stable/documentation/datasets.html#sample).
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render: Python
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validations:
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required: true
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- type: textarea
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attributes:
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label: Link to data
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description: |
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If you couldn't replicate on a built-in dataset, provide a link to a
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small, anonymized portion of your data that does yield the error.
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- type: textarea
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attributes:
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label: Expected results
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validations:
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required: true
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- type: textarea
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attributes:
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label: Actual results
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description: |
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Please provide the actual output, traceback, screenshot, or another description of the results.
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validations:
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required: true
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- type: textarea
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attributes:
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label: Additional information
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description: |
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Tell us about your system: paste the output of `mne.sys_info()` here.
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validations:
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required: true

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