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Fix group description #9

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Fix group description #9

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2d26753
Merge branch 'main' of https://github.com/nmdp-bioinformatics/hfx
pbashyal-nmdp Oct 13, 2025
10fc30b
Update README.md
pbashyal-nmdp Oct 13, 2025
3bb6ee5
Merge branch 'main' of https://github.com/nmdp-bioinformatics/hfx
pbashyal-nmdp Oct 14, 2025
e7c5615
Merge branch 'main' of https://github.com/nmdp-bioinformatics/hfx
pbashyal-nmdp Oct 15, 2025
2ded058
change 'group' description.
pbashyal-nmdp Oct 22, 2025
d880d5c
- Remove `group` from `nomenclature` in schema
pbashyal-nmdp Oct 27, 2025
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7 changes: 7 additions & 0 deletions .gitignore
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Original file line number Diff line number Diff line change
@@ -0,0 +1,7 @@
.DS_Store

.venv
venv

.idea

3 changes: 1 addition & 2 deletions examples/csv-frequency/cau.hfx-metadata.json
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Original file line number Diff line number Diff line change
Expand Up @@ -48,7 +48,6 @@
},
"nomenclatureUsed": {
"database": "IPD-IMGT/HLA",
"group": "",
"version": "3.20.0"
},
"producer": {
Expand All @@ -60,7 +59,7 @@
"year": "2007"
}
},
"frequencyLocation": "file://cau.csv",
"frequencyDataLocation": "file://cau.csv",
"checkSum": "8e7bb58cff1a32c250898c13f2c354f4"
}
}
3 changes: 1 addition & 2 deletions examples/inline-frequency/cau.hfx-metadata.json
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Original file line number Diff line number Diff line change
Expand Up @@ -48,7 +48,6 @@
},
"nomenclatureUsed": {
"database": "IPD-IMGT/HLA",
"group": "",
"version": "3.20.0"
},
"producer": {
Expand All @@ -60,7 +59,7 @@
"year": "2007"
}
},
"frequencyLocation": "inline"
"frequencyDataLocation": "inline"
},
"frequencyData": [
{
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10 changes: 3 additions & 7 deletions hfx.schema.json
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Expand Up @@ -35,7 +35,7 @@
"producer": {
"$ref": "#/$defs/producer"
},
"frequencyLocation": {
"frequencyDataLocation": {
"$ref": "#/$defs/frequencyDataLocation"
},
"license": {
Expand All @@ -52,7 +52,7 @@
"hfeMethod",
"cohortDescription",
"nomenclatureUsed",
"frequencyLocation"
"frequencyDataLocation"
],
"additionalProperties": false
},
Expand Down Expand Up @@ -163,7 +163,7 @@
"properties": {
"species": {
"type": "string",
"description": "The species the Hf set is based on"
"description": "Species as defined in https://www.ebi.ac.uk/ena/ i.e. https://www.ebi.ac.uk/ena/browser/view/Taxon:9606 for 'human'"
},
"population": {
"type": "array",
Expand Down Expand Up @@ -268,10 +268,6 @@
],
"description": "IPD main groups"
},
"group": {
"type": "string",
"description": "Groups such as NHP, DLA, FISH etc.."
},
"version": {
"type": "string",
"description": "Version of the IPD database"
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