[bot] Updating conda-lock files (v2.2.3)

Author: actions-user

conda/env/lock/pcgr-linux-64.lock

@@ -1,9 +1,9 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: b4c7566b652aedbdfa4b96f1e20761f5fe63e02d7b198374a101b266c8aa3535
+# input_hash: 630f1a97cc97f56bcf32b8ea7208723bb79a4b0d52b91d93a0319aa7cdb93eb0
 @EXPLICIT
 https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81
-https://conda.anaconda.org/conda-forge/noarch/kernel-headers_linux-64-3.10.0-he073ed8_18.conda#ad8527bf134a90e1c9ed35fa0b64318c
+https://conda.anaconda.org/conda-forge/noarch/kernel-headers_linux-64-4.18.0-he073ed8_8.conda#ff007ab0f0fdc53d245972bba8a6d40c
 https://conda.anaconda.org/conda-forge/linux-64/mpi-1.0-openmpi.tar.bz2#1dcc49e16749ff79ba2194fa5d4ca5e7
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 https://conda.anaconda.org/conda-forge/noarch/python_abi-3.12-7_cp312.conda#0dfcdc155cf23812a0c9deada86fb723
@@ -13,7 +13,7 @@ https://conda.anaconda.org/conda-forge/noarch/ca-certificates-2025.7.14-hbd8a1cb
 https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.44-h1423503_1.conda#0be7c6e070c19105f966d3758448d018
 https://conda.anaconda.org/conda-forge/noarch/libgcc-devel_linux-64-13.3.0-hc03c837_102.conda#4c1d6961a6a54f602ae510d9bf31fa60
 https://conda.anaconda.org/conda-forge/linux-64/libgomp-15.1.0-h767d61c_3.conda#3cd1a7238a0dd3d0860fdefc496cc854
-https://conda.anaconda.org/conda-forge/noarch/sysroot_linux-64-2.17-h0157908_18.conda#460eba7851277ec1fd80a1a24080787a
+https://conda.anaconda.org/conda-forge/noarch/sysroot_linux-64-2.28-h4ee821c_8.conda#1bad93f0aa428d618875ef3a588a889e
 https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2#73aaf86a425cc6e73fcf236a5a46396d
 https://conda.anaconda.org/conda-forge/linux-64/binutils_impl_linux-64-2.44-h4bf12b8_1.conda#e45cfedc8ca5630e02c106ea36d2c5c6
 https://conda.anaconda.org/conda-forge/linux-64/binutils_linux-64-2.44-h4852527_1.conda#38e0be090e3af56e44a9cac46101f6cd
@@ -24,7 +24,7 @@ https://conda.anaconda.org/bioconda/linux-64/dialign-tx-1.0.2-h7b50bb2_8.tar.bz2
 https://conda.anaconda.org/bioconda/linux-64/fasttree-2.1.11-h7b50bb2_5.tar.bz2#7d4c9a4caffaaa265fec1bc11cf4a884
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 https://conda.anaconda.org/conda-forge/linux-64/libdeflate-1.24-h86f0d12_0.conda#64f0c503da58ec25ebd359e4d990afa8
-https://conda.anaconda.org/conda-forge/linux-64/libexpat-2.7.0-h5888daf_0.conda#db0bfbe7dd197b68ad5f30333bae6ce0
+https://conda.anaconda.org/conda-forge/linux-64/libexpat-2.7.1-hecca717_0.conda#4211416ecba1866fab0c6470986c22d6
 https://conda.anaconda.org/conda-forge/linux-64/libffi-3.4.6-h2dba641_1.conda#ede4673863426c0883c0063d853bbd85
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@@ -47,7 +47,7 @@ https://conda.anaconda.org/conda-forge/linux-64/alsa-lib-1.1.5-h516909a_1002.tar
 https://conda.anaconda.org/conda-forge/linux-64/argtable2-2.13-hd590300_1004.conda#d7d089e975b1213c2a0f94e592b7b422
 https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-h4bc722e_7.conda#62ee74e96c5ebb0af99386de58cf9553
 https://conda.anaconda.org/bioconda/linux-64/clustalw-2.1-h9948957_12.tar.bz2#5989fcb871dabc90d1bb5de3d5c79185
-https://conda.anaconda.org/conda-forge/linux-64/expat-2.7.0-h5888daf_0.conda#d6845ae4dea52a2f90178bf1829a21f8
+https://conda.anaconda.org/conda-forge/linux-64/expat-2.7.1-hecca717_0.conda#6033d8c2bb9b460929d00ba54154614c
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 https://conda.anaconda.org/conda-forge/linux-64/jpeg-9e-h0b41bf4_3.conda#c7a069243e1fbe9a556ed2ec030e6407
@@ -131,6 +131,7 @@ https://conda.anaconda.org/bioconda/noarch/perl-devel-stacktrace-2.04-pl5321hdfd
 https://conda.anaconda.org/bioconda/noarch/perl-digest-hmac-1.04-pl5321hdfd78af_0.tar.bz2#872d481415766335aea1abc5b4b0a16d
 https://conda.anaconda.org/bioconda/linux-64/perl-digest-md5-2.58-pl5321hec16e2b_1.tar.bz2#a0af370445ef6aa9db1ecf41e4866d8c
 https://conda.anaconda.org/bioconda/noarch/perl-exporter-5.72-pl5321hdfd78af_2.tar.bz2#7353e88329199d78b6e4c7bef4fc835e
+https://conda.anaconda.org/bioconda/noarch/perl-exporter-tiny-1.002002-pl5321hdfd78af_0.tar.bz2#4cf435ed1fd536725957dda475522f57
 https://conda.anaconda.org/conda-forge/noarch/perl-extutils-makemaker-7.70-pl5321hd8ed1ab_0.conda#ec3e57ed34f7765bfc7054a05868ce5d
 https://conda.anaconda.org/bioconda/noarch/perl-file-sort-1.01-pl5321hdfd78af_3.tar.bz2#4e92e20759a9e525a2e98018b25e6100
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@@ -140,6 +141,7 @@ https://conda.anaconda.org/conda-forge/linux-64/perl-inc-latest-0.500-pl5321ha77
 https://conda.anaconda.org/bioconda/noarch/perl-io-html-1.004-pl5321hdfd78af_0.tar.bz2#41b9702808c81294c0b1dc112f239214
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+https://conda.anaconda.org/bioconda/linux-64/perl-list-moreutils-xs-0.430-pl5321h7b50bb2_5.tar.bz2#9192770eb08524038c3fcf24e915b10c
 https://conda.anaconda.org/bioconda/linux-64/perl-mime-base64-3.16-pl5321hec16e2b_2.tar.bz2#df1e0427e5991a539e6a7520f3728bc9
 https://conda.anaconda.org/bioconda/noarch/perl-module-load-0.34-pl5321hdfd78af_0.tar.bz2#45df92e53ca24c6a8e1bda8be712c0bf
 https://conda.anaconda.org/bioconda/noarch/perl-mozilla-ca-20211001-pl5321hdfd78af_0.tar.bz2#3143471a42244ba6dd52fb8f156a3915
@@ -183,6 +185,7 @@ https://conda.anaconda.org/bioconda/linux-64/perl-encode-3.19-pl5321hec16e2b_1.t
 https://conda.anaconda.org/bioconda/noarch/perl-exception-class-1.45-pl5321hdfd78af_0.tar.bz2#5c3c97db8109bee156618a9931bdd893
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 https://conda.anaconda.org/bioconda/noarch/perl-libxml-perl-0.08-pl5321hdfd78af_3.tar.bz2#1c365765ae910890ad8787ef53dab70c
+https://conda.anaconda.org/bioconda/noarch/perl-list-moreutils-0.430-pl5321hdfd78af_0.tar.bz2#7f04c79d216d0f8e7b6d5a51de4aafa0
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 https://conda.anaconda.org/bioconda/noarch/perl-ntlm-1.09-pl5321hdfd78af_5.tar.bz2#dac95634eb35296b62569c77e2ceef5c
@@ -208,7 +211,7 @@ https://conda.anaconda.org/conda-forge/noarch/dnspython-2.7.0-pyhff2d567_1.conda
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 https://conda.anaconda.org/conda-forge/linux-64/mysql-8.3.0-h27aab58_4.conda#876fca579d3aa248729bd7a2d38ae428
-https://conda.anaconda.org/conda-forge/linux-64/numpy-2.3.1-py312h6cf2f7f_0.conda#7e086a30150af2536a1059885368dcf0
+https://conda.anaconda.org/conda-forge/linux-64/numpy-2.3.1-py312h33ff503_1.conda#c459ad05f041827f8f479e88dfc29303
 https://conda.anaconda.org/bioconda/linux-64/perl-bio-samtools-1.43-pl5321he4a0461_4.tar.bz2#e766315d6c69e23e74e5917f77d96ab1
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@@ -248,7 +251,7 @@ https://conda.anaconda.org/conda-forge/linux-64/scipy-1.16.0-py312hf734454_0.con
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 https://conda.anaconda.org/bioconda/linux-64/pasta-1.9.2-py312hccd54bf_5.tar.bz2#3f48c3456f80f19bd1475529b6774241
-https://conda.anaconda.org/pcgr/noarch/pcgr-2.2.2-py_0.tar.bz2#e15cf223d617aa069500c8379188cdd9
+https://conda.anaconda.org/pcgr/noarch/pcgr-2.2.3-py_0.tar.bz2#266c11f80ca38b9b31aba65445cff5ee
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@@ -268,7 +271,7 @@ https://conda.anaconda.org/bioconda/noarch/perl-http-daemon-6.16-pl5321hdfd78af_
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-https://conda.anaconda.org/bioconda/noarch/ensembl-vep-113.0-pl5321h2a3209d_0.tar.bz2#b656f1321c5f365bf40a14c8c4b39659
+https://conda.anaconda.org/bioconda/noarch/ensembl-vep-113.4-pl5321h2a3209d_0.tar.bz2#2a98200bde6fb519b4555c3948349a65
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conda/env/lock/pcgr-osx-64.lock

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: osx-64
-# input_hash: 13bffde4b8d2be76e76a4fd720a32ae76c2143301d15a490898b6de1b6a08387
+# input_hash: ff21bdf3250250455452ea4f45c011874ea8ca4a10023edb1d2b491b05175ac2
 @EXPLICIT
 https://conda.anaconda.org/conda-forge/osx-64/argtable2-2.13-h10d778d_1004.conda#7ebcbc431363dfbf9ae25e6a7205d414
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@@ -19,7 +19,7 @@ https://conda.anaconda.org/conda-forge/osx-64/bzip2-1.0.8-hfdf4475_7.conda#7ed43
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-https://conda.anaconda.org/conda-forge/osx-64/libexpat-2.7.0-h240833e_0.conda#026d0a1056ba2a3dbbea6d4b08188676
+https://conda.anaconda.org/conda-forge/osx-64/libexpat-2.7.1-h21dd04a_0.conda#9fdeae0b7edda62e989557d645769515
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@@ -73,7 +73,7 @@ https://conda.anaconda.org/bioconda/noarch/perl-xml-regexp-0.04-pl5321hdfd78af_3
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-https://conda.anaconda.org/conda-forge/osx-64/expat-2.7.0-h240833e_0.conda#4ef6536484ba1c649effd23674fce3de
+https://conda.anaconda.org/conda-forge/osx-64/expat-2.7.1-h21dd04a_0.conda#20db53ab3b929f972b2ef6c7bad34eec
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@@ -203,7 +203,7 @@ https://conda.anaconda.org/bioconda/osx-64/blast-2.16.0-h461d46c_3.tar.bz2#b8ddc
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-https://conda.anaconda.org/conda-forge/osx-64/numpy-2.3.1-py312h3b44349_0.conda#81571392e3badcb8df4d02f143c59326
+https://conda.anaconda.org/conda-forge/osx-64/numpy-2.3.1-py312hda18a35_1.conda#c8053d81eb154da6c1dbad3e07dd28a9
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@@ -219,7 +219,7 @@ https://conda.anaconda.org/bioconda/osx-64/pybedtools-0.10.0-py312ha99f805_2.tar
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-https://conda.anaconda.org/pcgr/noarch/pcgr-2.2.2-py_0.tar.bz2#e15cf223d617aa069500c8379188cdd9
+https://conda.anaconda.org/pcgr/noarch/pcgr-2.2.3-py_0.tar.bz2#266c11f80ca38b9b31aba65445cff5ee
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@@ -230,7 +230,7 @@ https://conda.anaconda.org/bioconda/osx-64/perl-devel-checklib-1.16-pl5321h18d8c
 https://conda.anaconda.org/bioconda/osx-64/perl-dbd-mysql-4.050-pl5321h5fa12a8_3.tar.bz2#5dab89b250c95cb5573bd88447816f36
 https://conda.anaconda.org/bioconda/osx-64/perl-bio-bigfile-1.07-pl5321hfab4cba_5.tar.bz2#dbb8d01ace0a232fc8d9956acba0463c
 https://conda.anaconda.org/bioconda/osx-64/perl-bio-db-hts-3.01-pl5321h7f84b70_11.tar.bz2#5099c33120d71b608d2dc55fc6474034
-https://conda.anaconda.org/bioconda/noarch/ensembl-vep-113.0-pl5321h2a3209d_0.tar.bz2#b656f1321c5f365bf40a14c8c4b39659
+https://conda.anaconda.org/bioconda/noarch/ensembl-vep-113.4-pl5321h2a3209d_0.tar.bz2#2a98200bde6fb519b4555c3948349a65
 https://conda.anaconda.org/bioconda/noarch/perl-bioperl-1.7.8-hdfd78af_1.tar.bz2#a693939710e572d0f85f6058b534e319
 https://conda.anaconda.org/bioconda/noarch/perl-libwww-perl-6.68-pl5321hdfd78af_0.tar.bz2#6f7abab610c59c55a40fcc97178e4420
 https://conda.anaconda.org/bioconda/noarch/perl-lwp-protocol-https-6.10-pl5321hdfd78af_0.tar.bz2#6ad432164666124b1cd2ded4865a0e89

conda/env/lock/pcgrr-linux-64.lock

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 470dfa4268b88665a9e0d8493dadc28ce08984de3e4ee3a3f0af0add0d70a338
+# input_hash: c9c8b4e59a0ba9949e3fa86f0b5b1ee730468608250391aeb08ea99f2672e043
 @EXPLICIT
 https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81
 https://conda.anaconda.org/conda-forge/noarch/_r-mutex-1.0.1-anacondar_1.tar.bz2#19f9db5f4f1b7f5ef5f6d67207f25f38
@@ -10,7 +10,7 @@ https://conda.anaconda.org/conda-forge/noarch/font-ttf-dejavu-sans-mono-2.37-hab
 https://conda.anaconda.org/conda-forge/noarch/font-ttf-inconsolata-3.000-h77eed37_0.tar.bz2#34893075a5c9e55cdafac56607368fc6
 https://conda.anaconda.org/conda-forge/noarch/font-ttf-source-code-pro-2.038-h77eed37_0.tar.bz2#4d59c254e01d9cde7957100457e2d5fb
 https://conda.anaconda.org/conda-forge/noarch/font-ttf-ubuntu-0.83-h77eed37_3.conda#49023d73832ef61042f6a237cb2687e7
-https://conda.anaconda.org/conda-forge/noarch/kernel-headers_linux-64-3.10.0-he073ed8_18.conda#ad8527bf134a90e1c9ed35fa0b64318c
+https://conda.anaconda.org/conda-forge/noarch/kernel-headers_linux-64-4.18.0-he073ed8_8.conda#ff007ab0f0fdc53d245972bba8a6d40c
 https://conda.anaconda.org/conda-forge/linux-64/pandoc-3.6.3-ha770c72_0.conda#16ff7c679250dc09f9732aab14408d2c
 https://conda.anaconda.org/conda-forge/noarch/python_abi-3.13-7_cp313.conda#e84b44e6300f1703cb25d29120c5b1d8
 https://conda.anaconda.org/conda-forge/noarch/tzdata-2025b-h78e105d_0.conda#4222072737ccff51314b5ece9c7d6f5a
@@ -20,7 +20,7 @@ https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.44-h1423503_1
 https://conda.anaconda.org/conda-forge/noarch/libgcc-devel_linux-64-15.1.0-h4c094af_103.conda#ea67e87d658d31dc33818f9574563269
 https://conda.anaconda.org/conda-forge/linux-64/libgomp-15.1.0-h767d61c_3.conda#3cd1a7238a0dd3d0860fdefc496cc854
 https://conda.anaconda.org/conda-forge/noarch/libstdcxx-devel_linux-64-15.1.0-h4c094af_103.conda#83bbc814f0aeccccb5ea10267bea0d2e
-https://conda.anaconda.org/conda-forge/noarch/sysroot_linux-64-2.17-h0157908_18.conda#460eba7851277ec1fd80a1a24080787a
+https://conda.anaconda.org/conda-forge/noarch/sysroot_linux-64-2.28-h4ee821c_8.conda#1bad93f0aa428d618875ef3a588a889e
 https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2#73aaf86a425cc6e73fcf236a5a46396d
 https://conda.anaconda.org/conda-forge/linux-64/binutils_impl_linux-64-2.44-h4bf12b8_1.conda#e45cfedc8ca5630e02c106ea36d2c5c6
 https://conda.anaconda.org/conda-forge/noarch/fonts-conda-ecosystem-1-0.tar.bz2#fee5683a3f04bd15cbd8318b096a27ab
@@ -29,7 +29,7 @@ https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.34.5-hb9d3cd8_0.conda#f
 https://conda.anaconda.org/conda-forge/linux-64/deno-1.46.3-hcab8b69_0.conda#f8410ffda105ab8d380990bbdf9f266f
 https://conda.anaconda.org/bioconda/linux-64/jq-1.5-0.tar.bz2#f380e0813e0752164752d9a9c63667d7
 https://conda.anaconda.org/conda-forge/linux-64/libdeflate-1.24-h86f0d12_0.conda#64f0c503da58ec25ebd359e4d990afa8
-https://conda.anaconda.org/conda-forge/linux-64/libexpat-2.7.0-h5888daf_0.conda#db0bfbe7dd197b68ad5f30333bae6ce0
+https://conda.anaconda.org/conda-forge/linux-64/libexpat-2.7.1-hecca717_0.conda#4211416ecba1866fab0c6470986c22d6
 https://conda.anaconda.org/conda-forge/linux-64/libffi-3.4.6-h2dba641_1.conda#ede4673863426c0883c0063d853bbd85
 https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-15.1.0-h69a702a_3.conda#e66f2b8ad787e7beb0f846e4bd7e8493
 https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-15.1.0-hcea5267_3.conda#530566b68c3b8ce7eec4cd047eae19fe
@@ -328,5 +328,5 @@ https://conda.anaconda.org/bioconda/noarch/bioconductor-bsgenome.hsapiens.ucsc.h
 https://conda.anaconda.org/bioconda/noarch/bioconductor-genomicfeatures-1.54.1-r43hdfd78af_0.tar.bz2#445ea419486180673fffc192b5fe8edb
 https://conda.anaconda.org/bioconda/linux-64/bioconductor-variantannotation-1.48.1-r43ha9d7317_1.tar.bz2#01c0b8e76583c3f8872e3181dd06ffbd
 https://conda.anaconda.org/bioconda/noarch/bioconductor-mutationalpatterns-3.12.0-r43hdfd78af_0.tar.bz2#d22030798f7d464ddb092e4651625210
-https://conda.anaconda.org/pcgr/noarch/r-pcgrr-2.2.2-r43_0.tar.bz2#3d6b1414d890ae33fd82878cdeffe077
+https://conda.anaconda.org/pcgr/noarch/r-pcgrr-2.2.3-r43_0.tar.bz2#e1043b0a64db6201d93a2c1114fc05e4
 https://conda.anaconda.org/pcgr/noarch/r-cpsr-2.2.1-r43_0.tar.bz2#29946985033c9f27787108cd86076235