wrap text

Author: zhengxwen

NEWS

@@ -7,8 +7,8 @@ UTILITIES
 
     o new argument 'start' in `seqResetVariantID()`
 
-    o `seqAddValue()`: use bit1 for a logical vector; new argument 'use_float32' for
-      storing double
+    o `seqAddValue()`: use bit1 for a logical vector; new argument
+      'use_float32' for storing double
 
     o use `crayon::silver()` instead of `crayon::blurred()` in the display since
       RStudio blurs the screen output
@@ -20,7 +20,8 @@ UTILITIES
 
 BUG FIXES
 
-    o `seqBlockApply()` should recover the filter when the user-specified function fails
+    o `seqBlockApply()` should recover the filter when the user-specified
+      function fails
 
 
 CHANGES IN VERSION 1.46.2

man/seqBlockApply.Rd

@@ -55,7 +55,8 @@ seqBlockApply(gdsfile, var.name, FUN, margin=c("by.variant"),
 \code{"annotation/format/@VARIABLE_NAME"} are used to obtain the index
 associated with these variables.
 
-\code{"$chromosome"} returns chromosome codes in an object of \code{S4Vectors::Rle}.
+\code{"$chromosome"} returns chromosome codes in an object of
+\code{S4Vectors::Rle}.
 
 \code{"$dosage"} is also allowed for the dosages of reference allele (integer:
 0, 1, 2 and NA for diploid genotypes).

man/seqGetData.Rd

@@ -38,7 +38,8 @@ components) with a class name \code{SeqVarDataList}.
 \code{"annotation/format/@VARIABLE_NAME"} are used to obtain the index
 associated with these variables.
 
-\code{"$chromosome"} returns chromosome codes in an object of \code{S4Vectors::Rle}.
+\code{"$chromosome"} returns chromosome codes in an object of
+\code{S4Vectors::Rle}.
 
 \code{"$dosage"} is also allowed for the dosages of reference allele (integer:
 0, 1, 2 and NA for diploid genotypes).