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Scripts to generate figures for the manuscript titled "Large-scale skin metagenomics reveals extensive prevalence, coordination, and functional adaptation of skin microbiome dermotypes across body sites."

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ASMP Dermotype

Scripts to generate figures for the manuscript titled "Large-scale skin metagenomics reveals extensive prevalence, coordination, and functional adaptation of skin microbiome dermotypes across body sites."

Directory structure

Script: folder containing code used for this project

Data: input data used

  • Shotgun metagenomic sequencing data is available from the European Nucleotide Archive (ENA) under project accession number PRJEB87291.
  • Other large datasets and metabolomics data are available on Figshare.
  • The authors of this study do not own the rights to the HELIOS dataset, and this dataset is under controlled access to ensure good data governance, responsible data use, and that the dataset is only used for the intended research purposes in compliance with HELIOS study cohort IRB and ethics approval. Access to individual level data for study participants should be submitted to the HELIOS Data Access Committee (email: helios_science@ntu.edu.sg).

Contact

Chengchen Li(Cherry), Niranjan Nagarajan

Citation

The preprint is avaliable on biorxiv

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Scripts to generate figures for the manuscript titled "Large-scale skin metagenomics reveals extensive prevalence, coordination, and functional adaptation of skin microbiome dermotypes across body sites."

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