Lint

Add link to paper #5

	name: Lint

	on:
	push:
	branches: [ main ]
	tags: [ "*" ]
	pull_request:
	workflow_dispatch:

	jobs:
	black:
	name: Black (py39 style)
	runs-on: ubuntu-latest
	steps:
	- name: Checkout
	uses: actions/checkout@v4

	- name: Set up Python
	uses: actions/setup-python@v5
	with:
	python-version: "3.9"

	- name: Install tools
	run: \|
	python -m pip install --upgrade pip setuptools
	pip install black==22.8.0

	- name: Black (diff)
	run: black --diff -S -t py39 protein_tune_rl

	- name: Black (check)
	run: black --check -S -t py39 protein_tune_rl

	flake8:
	name: Flake8
	runs-on: ubuntu-latest
	needs: black
	steps:
	- name: Checkout
	uses: actions/checkout@v4

	- name: Set up Python
	uses: actions/setup-python@v5
	with:
	python-version: "3.9"

	- name: Install tools
	run: \|
	python -m pip install --upgrade pip setuptools
	pip install flake8==5.0.4

	- name: Run flake8
	run: flake8 --ignore E501,E203,W503 protein_tune_rl

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