ESP_CTD

A repository for the code for the metabarcoding comparison of ESP and CTD eDNA samples.

Analysis

The analysis directory contains all scripts this analysis.

Data

The data directory contains the data to be used in the scripts in the analysis directory.

Figures

The figures directory contains the plotting outputs from the scripts in the analysis directory.

Tables

The tables directory contains the tables for the manuscript, which are generated from the scripts in the analysis directory.

DEICODE

The DEICODE directory contains the intermediate files necessary for the DEICODE PCA scripts.