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Docker image does not contain necessary python env

Status: Open.

#277 In bioinform/varsim;

· gabeng opened on Apr 25, 2024

VarSim generated readnames too long for SAM/BAM

Status: Open.

#276 In bioinform/varsim;

· gabeng opened on Apr 24, 2024

somatic vcf is empty

Status: Open.

#275 In bioinform/varsim;

· Tina610 opened on Oct 8, 2023

varsim somatic errors for run_randvcf

Status: Open.

#274 In bioinform/varsim;

· Tina610 opened on Oct 7, 2023

Simulate Synthetic Reads with Structural Variants for a Given DGV

Status: Open.

#268 In bioinform/varsim;

· fardokhtsadat opened on Mar 29, 2022

Varsim build successfully but python packages aren't loadable

bug

Status: Open.

#260 In bioinform/varsim;

· gtollefson opened on Sep 2, 2021

varsim install error

Status: Open.

#251 In bioinform/varsim;

· biott opened on Feb 2, 2021

VarSim: Large structural variants (DELs) are not simulated.

Status: Open.

#249 In bioinform/varsim;

· bioinfo89 opened on Oct 23, 2020

VarSim error: ALT column is malformated: Found illegal character: 46

Status: Open.

#248 In bioinform/varsim;

· bioinfo89 opened on Oct 22, 2020

Reads covered by variants

Status: Open.

#230 In bioinform/varsim;

· ranijames opened on Oct 23, 2019

[ERROR] Failed to execute goal org.codehaus.mojo:versions-maven-plugin:2.7:set (default-cli): Goal requires a project to execute but there is no POM in this directory

Status: Open.

#229 In bioinform/varsim;

· zhangyafeng1 opened on Oct 23, 2019

inconsistent quality strings in error free sam file

Status: Open.

#225 In bioinform/varsim;

· jazberna1 opened on Oct 21, 2019