Skip to content

ci(dependabot): bump napari/napari from 0.6.2 to 0.6.3 in the github-actions group #810

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
merged 2 commits into from
Aug 12, 2025

Conversation

dependabot[bot]
Copy link
Contributor

@dependabot dependabot bot commented on behalf of github Aug 1, 2025

Bumps the github-actions group with 1 update: napari/napari.

Updates napari/napari from 0.6.2 to 0.6.3

Release notes

Sourced from napari/napari's releases.

0.6.3

napari 0.6.3

Thu, Jul 31, 2025

We’re happy to announce the release of napari 0.6.3!

napari is a fast, interactive, multi-dimensional image viewer for Python. It’s designed for exploring, annotating, and analyzing multi-dimensional images. It’s built on Qt (for the GUI), VisPy (for performant GPU-based rendering), and the scientific Python stack (NumPy, SciPy, and friends).

For more information, examples, and documentation, please visit our website: https://napari.org/

Highlights

A Zoom with a View 🔍

Pardon the play on words, but you can now zoom directly to a region of interest in the viewer by holding Alt and dragging with the mouse [(#8004)](napari/napari#8004). The camera will pan and zoom to fit the selected region, making it much easier to focus on specific areas of your data. This feature works in both 2D and 3D views.

GIF Displaying Alt-Drag Zoom Box Behavior

Fine Tuning Thick Slicing from the GUI 📏

Thick slicing controls are now available in the GUI [(#6146)](napari/napari#6146)! This allows you to project multiple slices together using different modes (sum, mean, max, and min) for better visualization of your multidimensional data. You can access the thickness controls by right-clicking on the dimension sliders to open a popup to change the margins either symmetrically or asymmetrical and projection mode settings are now available per layer in the layer controls widget.

GIF Displaying Thick Slicing GUI Controls

Run Scripts by Dragging and Dropping into the Viewer 🖱️

Scripts can now be run by dragging and dropping them into the viewer [(#8135)](napari/napari#8135)! This is particularly useful for running napari examples without having to use the command line; you can even run these scripts from the bundled install! This works by adding a .py reader to napari's builtins.

Image Depicting a User dragging a script into the viewer

Windows: Access Denied Fixed 🪟

A critical Windows-specific bug that caused Access Violation errors has been resolved [(#8122)](napari/napari#8122)! This longstanding issue would cause napari to stop displaying layers due to various events and often occurred at seemingly non-reproducible times, and required a full restart of napari. The fix ensures proper cleanup and syncing of GPU resources, also reducing memory usage on all platforms. If you were an effected user, you may recall it as Access Violation, 0x000000000000001C if triggered without a plugin, or 0x000000000000034C if triggered with a plugin.

Improved PySide6 Support 🛠️

Napari now has improved support for PySide6 [(#7887)](napari/napari#7887). We encourage plugin developers to test against PySide6, as a fully supported backend going forward. Additionally, this change will enable us to drop PySide2 along side Python 3.10, in the near future. If you are a plugin developer or otherwise depend on napari and PySide2, please reach out on Zulip or Github.

New Features

  • Qt controls for thick slicing (#6146)
  • Add automatic area and perimeter measurement for shapes + action (#7262)
  • Add 'zoom-box' to the viewer (#8004)
  • Add viewbox coordinates to events and Cursor (#8130)
  • feat: Add option to execute python code by drag'n'drop script to viewer (#8135)

Improvements

... (truncated)

Commits
  • 2f7f057 Add variables from drag and drop to console (#8174)
  • afd006c Update Citation file for 0.6.1 through 0.6.3 (#8138)
  • e164946 Update list of affiliation of Grzegorz Bokota (#8179)
  • d5fe9e5 Remove np.asarray(self.cursor._view_direction) that return unbound array (#...
  • d1969c1 feat: Add option to execute python code by drag'n'drop script to viewer (#8135)
  • 877b964 [pre-commit.ci] pre-commit autoupdate (#8158)
  • 94c78fd Ensure contrast limits are computed on original dtype with projected thick sl...
  • 2b11437 Update xarray_nD_image_.py to use xarray tag (#8167)
  • 335b699 Fix reporting python version in benchmark bug reports (#8169)
  • 52bb2fe Use pytest-rerunfailures for flaky test_toggle_fullscreen_from_maximized ...
  • Additional commits viewable in compare view

Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

  • @dependabot rebase will rebase this PR
  • @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
  • @dependabot merge will merge this PR after your CI passes on it
  • @dependabot squash and merge will squash and merge this PR after your CI passes on it
  • @dependabot cancel merge will cancel a previously requested merge and block automerging
  • @dependabot reopen will reopen this PR if it is closed
  • @dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
  • @dependabot show <dependency name> ignore conditions will show all of the ignore conditions of the specified dependency
  • @dependabot ignore <dependency name> major version will close this group update PR and stop Dependabot creating any more for the specific dependency's major version (unless you unignore this specific dependency's major version or upgrade to it yourself)
  • @dependabot ignore <dependency name> minor version will close this group update PR and stop Dependabot creating any more for the specific dependency's minor version (unless you unignore this specific dependency's minor version or upgrade to it yourself)
  • @dependabot ignore <dependency name> will close this group update PR and stop Dependabot creating any more for the specific dependency (unless you unignore this specific dependency or upgrade to it yourself)
  • @dependabot unignore <dependency name> will remove all of the ignore conditions of the specified dependency
  • @dependabot unignore <dependency name> <ignore condition> will remove the ignore condition of the specified dependency and ignore conditions

Bumps the github-actions group with 1 update: [napari/napari](https://github.com/napari/napari).


Updates `napari/napari` from 0.6.2 to 0.6.3
- [Release notes](https://github.com/napari/napari/releases)
- [Commits](napari/napari@eb7a00f...2f7f057)

---
updated-dependencies:
- dependency-name: napari/napari
  dependency-version: 0.6.3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code labels Aug 1, 2025
@github-actions github-actions bot added the maintenance CI, dependencies, and other maintenance label Aug 1, 2025
@psobolewskiPhD psobolewskiPhD added this to the 0.6.4 milestone Aug 1, 2025
@TimMonko
Copy link
Contributor

TimMonko commented Aug 12, 2025

@psobolewskiPhD reading the error here --> it looks like docs built well, so is this just a problem with the ready-to-merge action? https://github.com/napari/docs/actions/runs/16675874131/job/47613615122

@psobolewskiPhD
Copy link
Member

It's something specific to the bot prs & branches

Error: Resource not accessible by integration

never seen it anywhere else. I don't have the time right now to dig at it; I think we can ignore it.

@TimMonko
Copy link
Contributor

Thanks @psobolewskiPhD ❤️

@TimMonko TimMonko merged commit aeb60bd into main Aug 12, 2025
9 checks passed
@TimMonko TimMonko deleted the dependabot/github_actions/github-actions-04ac107444 branch August 12, 2025 21:30
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code maintenance CI, dependencies, and other maintenance
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants