Collection of analysis scripts for RAYN Vision System (RVS) Analytics that are maintained by RAYN.
RVS analysis scripts basically are PlantCV workflows. They consist of two main parts:
- Object segmentation ("Masking") - separate objects from background
- Object analysis ("Analysis") - quantify certain object parameters (depending on the experiment)
More information, details and explanations can be found here: Workflow Development (PlantCV)
Each analysis script consists of a folder containing three files:
- SCRIPT_NAME.py - Actual python script, containing the PlantCV workflow
- SCRIPT_NAME.config - Configuration file setting the UI elements in the mask UI interface
- README.md - Describes the function and purpose of the respective mask script
Pull this repository or add the script folders to the "Scripts" folder of RVS Analytics.
All available analysis scripts are shown in the respective drop-down menu and can be selected from there. Each analysis script has an inbuilt default mask script. However, it is possible to select a different mask scripts from the respective mask drop-down menu.
If you experience any problems or have feedback on the analysis scripts, please add an issue to this repository or contact RAYN Vision Support.
Whether it's fixing bugs, adding functionality to existing analysis scripts or adding entirely new analysis scripts, we welcome contributions.
More information, details and explanations on how to create custom RVS analysis scripts can be found here: Custom Scripts (RVS-A)
© 2024 ETC Inc d/b/a RAYN Growing Systems. Licensed under the Apache License, Version 2.0 You may not use the files in this repository except in compliance with the License.
Trademark and patent info: rayngrowingsystems.com/ip
Third-party license agreement info: etcconnect.com/licenses
Product and specifications subject to change.