Files and code used to generate the CARTAR app to identify and validate CAR targets for cancer treatment.
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Nov 12, 2024 - Python
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car-t
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Repository for analyses of HHV-6 reactivation using genomics
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Nov 4, 2023 - HTML
TAVNIT is a pipeline dedicated to the identification of targets for CAR-Ts and other anticancer drugs. The pipeline comprises cancer subtyping and subsequent extraction of cancer subtype signatures. It utilizes hierarchical clustering with constraints and an Ant Colony Optimization algorithm. Author: Dmitri Finaev (ORCID 0000-0003-3470-8501)
ant-colony-optimization transcriptomics cancer-subtypes cancer-signatures car-t hierarchical-clustering-with-constraints anticancer-drugs targeted-medicine surfaceome druggable-cancer-targets tavnit
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Oct 17, 2024 - Python
Single-cell transcriptomic profiling of CAR T cells expressing synthetic receptors, termed "velocity CAR T" cells.
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May 4, 2025 - R
Single-cell analysis of CAR T-cell therapy responses, identifying cellular signatures and pathways associated with treatment outcomes.
python integration rstudio immunology t-cell single-cell immunoinformatics seurat car-t harmon scanorama scmerge2
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Apr 29, 2025 - Jupyter Notebook
Files and code used to generate the CARTAR app to identify and validate CAR targets for cancer treatment.
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Mar 5, 2025 - Python
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