Genome-wide extraction of real-valued signals hidden in noisy multisample HTS data
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Nov 7, 2025 - Python
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cut-and-run
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Step-by-step instructions and Snakemake pipeline for processing Cut&Run data
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Sep 8, 2023 - Python
qPCR Plate Planner is a browser based tool to streamline the design, execution, and analysis of qPCR experiments. It is particularly suited for chromatin profiling workflows such as CUT&RUN, CUT&Tag, and ChIP-qPCR, where comparative epigenetic mark enrichment is quantified using the ΔΔCt method
epigenetics workflow-automation experimental-design qpcr-analysis gene-quantification master-mix plate-layout-design cut-and-run workflow-automation-tools fold-change-analysis chip-qpcr 384-well ddct-analysis chromatin-enrichment
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Oct 27, 2025 - HTML
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