Implementations of various simulations for integrate and fire models, as well as conductance based models with synaptic neurotransmission

Model of the hippocampus over the sleep-wake cycle using Hodgkin-Huxley neurons (Aussel et al 2018)

Numerical Integration of Izhikevich and HH model neurons (Stewart and Bair 2009)

Biophysically detailed model of somatosensory thalamocortical circuit (Borges et al accepted)

Sodium potassium ATPase pump (Chapman et al. 1983)

Simulated cortical color opponent receptive fields self-organize via STDP (Eguchi et al., 2014)

NMDAR & GABAB/KIR Give Bistable Dendrites: Working Memory & Sequence Readout (Sanders et al., 2013)

LIP and FEF rhythmic attention model (Aussel et al. 2023)

Stochastic versions of the Hodgkin-Huxley equations (Goldwyn, Shea-Brown 2011) (pylab)

Ion concentration dynamics as a mechanism for neuronal bursting (Barreto & Cressman 2011)

Gamma genesis in the basolateral amygdala (Feng et al 2019)

Squid axon: Bifurcation analysis of mode-locking (Lee & Kim 2006) (Gangal & Dar 2014)

Stochastic versions of the Hodgkin-Huxley equations (Goldwyn, Shea-Brown 2011)

A Moth MGC Model-A HH network with quantitative rate reduction (Buckley & Nowotny 2011)

Parallel Tempering MCMC on Liu et al 1998 (Wang et al 2022)

Reduction of nonlinear ODE systems possessing multiple scales (Clewley et al. 2005)

Burst and tonic firing behaviour in subfornical organ (SFO) neurons (Medlock et al 2018)

Model of the Xenopus tadpole swimming spinal network (Roberts et al. 2014)

Python scripts supporting a tutorial on the Hodgkin-Huxley model.

Convergence regulates synchronization-dependent AP transfer in feedforward NNs (Sailamul et al 2017)