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New module: ANTISMASH_ANTISMASH and ANTISMASH_DOWNLOADDATABASES #8493

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@jfy133 jfy133 commented May 16, 2025

Antismashlite is unnecessary as the biocontaioners version of antismash no longer includes the database

This also updates to 8.0.0 and uses a nf-core hosted container, due to unsolveable problems on the biocointaers one (see readme)

Note: I've not yet touched/updated/re-generated tests yet

@jfy133 jfy133 changed the title New module: with new container (NO TESTS YET) New module: ANTISMASH_ANTISMASH and ANTISMASH_DOWNLOADDATABASES May 16, 2025
@jfy133 jfy133 requested a review from mberacochea May 16, 2025 12:38
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